• Health Informatics

  01 Feb 2020

  My experience with the health Informatics data warehouse - pilot project September 2018 - September 2020 Supervisors Matthias Görges, Elodie Portales-Casamar Part of the E2i program and “Work and Learn” at the UBC Special thanks to Dawn Mount and Marissa Gibbard Data warehouse literature review - common data warehouse architectures...

• Functional Genome Annotation

  30 Sep 2018

  “Because in the end, you won’t remember the time you spent working in the office or mowing your lawn. Climb that goddamn mountain.” ― Jack Kerouac The genome annotation includes two main steps, structural and functional genome annotation. The first one defines the coordinates of the genes in the genome...

• Iterative Maker

  07 Aug 2018

  “For me, the best description of hunger is the description of bread. A poet said that once I think. For me, the best description of freedom is what you have in front of you. You’re travelling a lot.” ― Werner Herzog, Encounters at the End of the World Seriosuly, if...

• Augustus Optimization

  25 Jul 2018

  “We don’t want to focus on the trees (or their leaves) at the expense of the forest.” ― Douglas R. Hofstadter, I Am a Strange Loop I am recently working with the Augustus colossus which is one of the most important gene prediction tools. It’s actually even more important in...

• Genome Annotation Of Spruce

  28 May 2018

  “So Zeno is most famous for his tortoise paradox. Let us imagine that you are in a race with a tortoise. The tortoise has a ten-yard head start. In the time it takes you to run that ten yards, the tortoise has moved one yard. And then in the time...